PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00009338-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bHLH
Protein Properties Length: 504aa    MW: 56125.7 Da    PI: 5.4864
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00009338-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.68.2e-12297343354
                         HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         ++h   Er RR+  N++++ Lr+l+P++     +K + a+++  A++YIk+L
  WALNUT_00009338-RA 297 TKHLTTERERRQSWNDKYNALRSLVPNP-----TKADRASVVGDAIDYIKEL 343
                         678899**********************.....9****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.557294343IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.71E-14297361IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-12297352IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.6E-9297343IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.66E-10297347No hitNo description
SMARTSM003531.8E-9300349IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 504 aa     Download sequence    Send to blast
MYEETGCFDT NPMSEDAVAV AVAVAEDGFS QTVPNCTHNS FEDNLRLSME ELSYQHHNHN  60
QTSIHDQDAA AAAAATAMEI ELQQHLAFNM DSSYNGHNHS NTHLVDSSYG VHEMQEMDPF  120
NHHHHHQDQQ QLQQIDIQNG LQSYDYSSLP NSPYPPTPDL LNLFHLPRCS ASSLPHNSSI  180
SFSNPGQKTS ASYQSSHLGD IPTGADSASG ASVLYDPLFH LNLPPQPPLF RQLFGQSLPN  240
GYSLPGSRNG SLFGTGGDER EGNGGVYQDG DVRQFENGVL EFSRDMGCIR KGRDGETKHL  300
TTERERRQSW NDKYNALRSL VPNPTKADRA SVVGDAIDYI KELLRTVNEL KLLVEKKRCG  360
RERGKRQKTE GEDTAGDVEN YNTKHVGDPH DGQSYNGSLR SSWLQRKSKD TEVDVRIIDD  420
EVTIKLVQRK NNCLLFVSKA LDELQLDLHH VAGGQCGDFY SFLFNTKIYE GSSVYASSIA  480
NKLIEVVDRQ CCAAMNINQP TSSY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010661301.10.0PREDICTED: transcription factor bHLH91-like
TrEMBLA5BKY10.0A5BKY1_VITVI; Putative uncharacterized protein
STRINGVIT_15s0107g00380.t011e-180(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37433262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.15e-78bHLH family protein